- Predicted Gene MLOC_61292
MLOC_61292 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.0846692 | 0.108005 | 0.0638465 | 0.095111 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.40679 | 0.280802 | 0.234798 | 0.247887 |
| INF1 | Young developing inflorescences (5mm) | 3.50985 | 3.50566 | 4.69831 | 3.05228 |
| INF2 | Developing inflorescences (1-1.5 cm) | 3.70956 | 4.25005 | 3.86698 | 4.05833 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.197744 | 0.260297 | 0.757623 | 0.31352 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 8.59908 | 3.72619 | 5.33976 | 10.5978 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.0664008 | 0.0624292 | 0.0914477 | 0.0647687 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0 | 0 | 0 |
CDS Structure of MLOC_61292
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_61292.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g03100.1 |
+3 |
3e-29 |
115 |
57/61 (93%) |
13103.m00285 protein OsMADS50 - MADS-box family gene with MIKCc type-box, expressed |
| TAIR PP10 |
AT2G45660.1 |
+3 |
3e-26 |
109 |
54/64 (84%) |
| Symbols: AGL20, SOC1, ATSOC1 | AGAMOUS-like 20 | chr2:18807799-18810193 REVERSE LENGTH=214 |