MLOC_61272 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.7663611.13659.952348.97748
LEAShoots from the seedlings (10 cm shoot stage)13.14312.778412.956811.2036
INF1Young developing inflorescences (5mm)22.733920.428517.538316.9057
INF2Developing inflorescences (1-1.5 cm)26.045923.11621.07425.0035
ROORoots from the seedlings (10 cm shoot stage)8.1535514.263911.879415.8546
NODDeveloping tillers at six leaf stage, 3rd internode3.247964.206764.9316214.9261
CAR5Developing grain, bracts removed (5 DPA)19.855117.165618.184516.9711
CAR15Developing grain, bracts removed (15 DPA)8.442987.967048.0153817.8538



CDS Structure of MLOC_61272






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61272.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369781NoneNoneNoneNone
MLOC_61272.1CUST_4438_PI427708080AvailableAvailablecontig_453346 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g59460.1 -1 0.0 2457 1382/1781 (78%) 13104.m06267 protein expressed protein
TAIR PP10 AT4G31160.1 -1 0.0 1355 862/1818 (47%) | Symbols: DCAF1 | DDB1-CUL4 associated factor 1 | chr4:15145936-15152939 FORWARD LENGTH=1883