MLOC_61267 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains44.099239.100739.428843.3078
LEAShoots from the seedlings (10 cm shoot stage)26.442821.959819.294919.659
INF1Young developing inflorescences (5mm)50.911250.111751.471945.4305
INF2Developing inflorescences (1-1.5 cm)51.073650.378751.926859.6652
ROORoots from the seedlings (10 cm shoot stage)45.695649.875756.434864.8689
NODDeveloping tillers at six leaf stage, 3rd internode31.431230.989230.3142106.748
CAR5Developing grain, bracts removed (5 DPA)45.042547.049445.737249.2771
CAR15Developing grain, bracts removed (15 DPA)14.242114.46915.516736.3835



CDS Structure of MLOC_61267






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61267.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK371678NoneNoneNoneNone
MLOC_61267.1CUST_4436_PI427708080AvailableAvailablecontig_45327 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g18510.1 +3 0.0 551 312/339 (92%) 13103.m02218 protein expressed protein
TAIR PP10 AT2G40290.1 +3 3e-154 449 237/312 (76%) Eukaryotic translation initiation factor 2 subunit 1 | chr2:16829030-16830889 REVERSE LENGTH=344