MLOC_61255 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.7022610.21529.266299.35331
LEAShoots from the seedlings (10 cm shoot stage)9.767746.879647.76997.21313
INF1Young developing inflorescences (5mm)12.786314.473114.114112.2182
INF2Developing inflorescences (1-1.5 cm)25.666128.660526.846531.0307
ROORoots from the seedlings (10 cm shoot stage)4.52158.153125.07159.49004
NODDeveloping tillers at six leaf stage, 3rd internode11.521819.685617.004364.2408
CAR5Developing grain, bracts removed (5 DPA)16.633214.714416.805316.2963
CAR15Developing grain, bracts removed (15 DPA)5.472424.924916.0395312.9377



CDS Structure of MLOC_61255






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61255.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_61255.1CUST_14251_PI427708080AvailableAvailablecontig_45310 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g40520.1 +2 0.0 858 447/551 (81%) 13107.m04210 protein formin-like protein 20, putative
TAIR PP10 AT5G07740.1 +2 3e-154 524 277/395 (70%) actin binding | chr5:2459076-2466580 REVERSE LENGTH=1649