MLOC_6125 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 8.27118 | 9.17415 | 10.1285 | 8.91582 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 32.2451 | 17.1748 | 18.3758 | 19.364 |
| INF1 | Young developing inflorescences (5mm) | 8.52183 | 9.18638 | 11.531 | 8.00274 |
| INF2 | Developing inflorescences (1-1.5 cm) | 51.5708 | 28.3476 | 52.9349 | 45.3092 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 43.8245 | 27.7029 | 27.4976 | 35.9339 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 8.5713 | 10.7923 | 11.8775 | 37.1835 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 33.6865 | 32.3466 | 24.4963 | 29.2895 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 31.5339 | 29.0222 | 32.6592 | 69.5249 |
CDS Structure of MLOC_6125
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_6125.10
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g30140.2 |
-1 |
2e-95 |
293 |
159/188 (85%) |
13105.m03074 protein RNA recognition motif containing protein, expressed |
| TAIR PP10 |
AT1G09140.2 |
-1 |
3e-84 |
262 |
139/188 (74%) |
| Symbols: ATSRP30, SR30, At-SR30 | SERINE-ARGININE PROTEIN 30 | chr1:2943528-2945818 REVERSE LENGTH=256 |
