MLOC_61220 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.740487.233175.435484.71456
LEAShoots from the seedlings (10 cm shoot stage)6.942444.478353.201883.6731
INF1Young developing inflorescences (5mm)11.620312.687112.6239.80799
INF2Developing inflorescences (1-1.5 cm)15.23314.798315.948315.5348
ROORoots from the seedlings (10 cm shoot stage)1.783134.641565.457034.20318
NODDeveloping tillers at six leaf stage, 3rd internode7.445785.048114.9649112.3527
CAR5Developing grain, bracts removed (5 DPA)12.797610.569111.799510.5073
CAR15Developing grain, bracts removed (15 DPA)2.820682.633753.050316.55101



CDS Structure of MLOC_61220






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61220.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_61220.1CUST_12881_PI427708083AvailableAvailablecontig_45281 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g01190.1 +1 1e-14 77 51/86 (59%) 13103.m00023 protein dehydrogenase, putative, expressed
TAIR PP10 AT5G61510.1 +1 1e-12 70 44/64 (69%) GroES-like zinc-binding alcohol dehydrogenase family protein | chr5:24737084-24738975 REVERSE LENGTH=406