MLOC_61217 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains29.295818.781821.098620.0314
LEAShoots from the seedlings (10 cm shoot stage)13.02867.9018410.68087.86331
INF1Young developing inflorescences (5mm)0.2105890.08173590.1728050.129092
INF2Developing inflorescences (1-1.5 cm)0.4554560.6119090.7535140.60909
ROORoots from the seedlings (10 cm shoot stage)116.64640.02738.228749.9665
NODDeveloping tillers at six leaf stage, 3rd internode176.167154.714346.952469.564
CAR5Developing grain, bracts removed (5 DPA)8.596810.98269.735248.94616
CAR15Developing grain, bracts removed (15 DPA)0.7406920.3807210.7254281.4942



CDS Structure of MLOC_61217






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61217.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK373282NoneNoneNoneNone
MLOC_61217.1CUST_4427_PI427708080AvailableAvailablecontig_45276 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g15320.1 +1 3e-31 118 53/55 (96%) 13101.m01693 protein RALFL9 - Rapid ALkalinization Factor RALF family protein precursor, expressed
TAIR PP10 AT4G15800.1 +1 2e-18 82 38/53 (72%) | Symbols: RALFL33 | ralf-like 33 | chr4:8984915-8985265 FORWARD LENGTH=116