- Predicted Gene MLOC_61217
MLOC_61217 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_61217_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_61217_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 29.2958 | 18.7818 | 21.0986 | 20.0314 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 13.0286 | 7.90184 | 10.6808 | 7.86331 |
INF1 | Young developing inflorescences (5mm) | 0.210589 | 0.0817359 | 0.172805 | 0.129092 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.455456 | 0.611909 | 0.753514 | 0.60909 |
ROO | Roots from the seedlings (10 cm shoot stage) | 116.646 | 40.027 | 38.2287 | 49.9665 |
NOD | Developing tillers at six leaf stage, 3rd internode | 176.167 | 154.714 | 346.952 | 469.564 |
CAR5 | Developing grain, bracts removed (5 DPA) | 8.5968 | 10.9826 | 9.73524 | 8.94616 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.740692 | 0.380721 | 0.725428 | 1.4942 |
CDS Structure of MLOC_61217
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_61217.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g15320.1 |
+1 |
3e-31 |
118 |
53/55 (96%) |
13101.m01693 protein RALFL9 - Rapid ALkalinization Factor RALF family protein precursor, expressed |
TAIR PP10 |
AT4G15800.1 |
+1 |
2e-18 |
82 |
38/53 (72%) |
| Symbols: RALFL33 | ralf-like 33 | chr4:8984915-8985265 FORWARD LENGTH=116 |