MLOC_61209 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1128760.2043110.3350070.195617
LEAShoots from the seedlings (10 cm shoot stage)0.8143940.2868180.5377140.448705
INF1Young developing inflorescences (5mm)0.028803200.009313650.0163845
INF2Developing inflorescences (1-1.5 cm)0.0209940.03328950.01843840.0270431
ROORoots from the seedlings (10 cm shoot stage)0.1044540.0669460.1035490.0865065
NODDeveloping tillers at six leaf stage, 3rd internode1.46722.028541.507745.10788
CAR5Developing grain, bracts removed (5 DPA)0.6630410.9013390.7003870.67272
CAR15Developing grain, bracts removed (15 DPA)0.5583950.4960840.494181.15145



CDS Structure of MLOC_61209






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61209.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_61209.1NoneAvailableAvailablecontig_45267 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g50990.4 +2 5e-16 80 34/40 (85%) 13102.m05793 protein RING-H2 finger protein ATL1Q, putative, expressed
TAIR PP10None-----