MLOC_61206 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.68976.764717.628677.58689
LEAShoots from the seedlings (10 cm shoot stage)5.234631.856943.278642.77703
INF1Young developing inflorescences (5mm)0.3321330.3270280.4223010.335323
INF2Developing inflorescences (1-1.5 cm)0.2360020.2298110.1985050.268192
ROORoots from the seedlings (10 cm shoot stage)8.9740210.34766.625510.9586
NODDeveloping tillers at six leaf stage, 3rd internode112.167120.00317.1504245.352
CAR5Developing grain, bracts removed (5 DPA)0.4455390.4295420.3704380.440115
CAR15Developing grain, bracts removed (15 DPA)0.1664590.1054680.01854960.287309



CDS Structure of MLOC_61206






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61206.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK353671NoneNoneNoneNone
MLOC_61206.1CUST_4426_PI427708080AvailableAvailablecontig_45263 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g62490.1 -3 0.0 992 487/548 (89%) 13101.m06696 protein laccase precursor protein, putative, expressed
TAIR PP10 AT5G60020.1 -3 0.0 802 388/555 (70%) | Symbols: LAC17, ATLAC17 | laccase 17 | chr5:24168072-24170223 FORWARD LENGTH=577