MLOC_61199 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains12.689310.72869.9284312.3974
LEAShoots from the seedlings (10 cm shoot stage)14.131916.744622.505115.8282
INF1Young developing inflorescences (5mm)10.481412.21311.284710.8467
INF2Developing inflorescences (1-1.5 cm)8.863299.64489.8240611.4195
ROORoots from the seedlings (10 cm shoot stage)12.016912.41789.4976315.9376
NODDeveloping tillers at six leaf stage, 3rd internode10.347510.529616.196734.6438
CAR5Developing grain, bracts removed (5 DPA)8.8892810.84919.1816610.8412
CAR15Developing grain, bracts removed (15 DPA)3.809073.845743.2832710.0852



CDS Structure of MLOC_61199






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61199.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356605NoneNoneNoneNone
MLOC_61199.2CUST_4424_PI427708080AvailableAvailablecontig_45250 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g33220.1 -2 9e-78 244 179/245 (73%) 13104.m03204 protein SAM domain family protein, expressed
TAIR PP10 AT5G24650.1 -2 6e-51 174 137/238 (58%) Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein | chr5:8437123-8438859 FORWARD LENGTH=259