MLOC_61185 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains263.569197.305216.182207.061
LEAShoots from the seedlings (10 cm shoot stage)142.16193.6697111.10988.81
INF1Young developing inflorescences (5mm)53.540749.771554.851942.6799
INF2Developing inflorescences (1-1.5 cm)27.825328.0434.059331.3992
ROORoots from the seedlings (10 cm shoot stage)177.887171.385228.9192.357
NODDeveloping tillers at six leaf stage, 3rd internode165.44251.590349.1034137.892
CAR5Developing grain, bracts removed (5 DPA)61.19760.842460.803958.8084
CAR15Developing grain, bracts removed (15 DPA)18.277216.915614.86939.6481



CDS Structure of MLOC_61185






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61185.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_61185.1CUST_12880_PI427708083AvailableAvailablecontig_45207 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g34770.1 -1 1e-41 146 67/75 (89%) 13105.m03622 protein cytochrome c, putative, expressed
TAIR PP10 AT1G22840.2 -1 3e-43 149 71/89 (80%) | Symbols: CYTC-1, ATCYTC-A | CYTOCHROME C-1 | chr1:8079384-8080246 FORWARD LENGTH=102