- Predicted Gene MLOC_61171
MLOC_61171 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 11.7451 | 10.7043 | 9.55183 | 11.8406 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 19.6955 | 27.1567 | 38.2118 | 25.5441 |
| INF1 | Young developing inflorescences (5mm) | 5.4538 | 4.78149 | 4.85296 | 4.72009 |
| INF2 | Developing inflorescences (1-1.5 cm) | 6.7821 | 5.62881 | 4.81941 | 7.06868 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 17.7775 | 12.592 | 11.9134 | 17.3147 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 16.3354 | 32.163 | 15.4984 | 95.2842 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 17.1682 | 20.2493 | 14.5657 | 19.4918 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 5.86281 | 5.60628 | 4.9734 | 14.7216 |
CDS Structure of MLOC_61171
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_61171.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g55880.1 |
-3 |
7e-99 |
296 |
146/168 (87%) |
13102.m06415 protein EF hand family protein, putative, expressed |
| TAIR PP10 |
AT3G18430.2 |
-3 |
6e-80 |
247 |
119/168 (71%) |
Calcium-binding EF-hand family protein | chr3:6326180-6327476 FORWARD LENGTH=175 |