MLOC_61166 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.0653810.813610.39929.1121
LEAShoots from the seedlings (10 cm shoot stage)11.30168.27219.00238.17452
INF1Young developing inflorescences (5mm)21.357522.288919.765817.3155
INF2Developing inflorescences (1-1.5 cm)20.69224.548120.342622.7779
ROORoots from the seedlings (10 cm shoot stage)6.5498910.45897.3296411.3482
NODDeveloping tillers at six leaf stage, 3rd internode4.458026.869815.5063521.461
CAR5Developing grain, bracts removed (5 DPA)18.214517.224517.948415.7654
CAR15Developing grain, bracts removed (15 DPA)8.469117.536167.6338417.1456



CDS Structure of MLOC_61166






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61166.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_61166.1CUST_14241_PI427708080AvailableAvailablecontig_45174 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g05920.1 +2 2e-154 476 250/431 (58%) 13112.m00601 protein ZOS12-01 - C2H2 zinc finger protein, expressed
TAIR PP10None-----