MLOC_61135 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains126.701142.822145.554138.759
LEAShoots from the seedlings (10 cm shoot stage)90.917779.659574.010269.6622
INF1Young developing inflorescences (5mm)59.933956.571352.940747.3144
INF2Developing inflorescences (1-1.5 cm)41.11748.957951.128950.9104
ROORoots from the seedlings (10 cm shoot stage)56.581793.703589.8967105.637
NODDeveloping tillers at six leaf stage, 3rd internode120.98775.897355.8117259.509
CAR5Developing grain, bracts removed (5 DPA)41.985839.916537.686938.7039
CAR15Developing grain, bracts removed (15 DPA)6.939936.935417.1893315.947



CDS Structure of MLOC_61135






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61135.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357347NoneNoneNoneNone
MLOC_61135.1CUST_4414_PI427708080AvailableAvailablecontig_45144 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g56290.5 +3 0.0 561 285/336 (85%) 13104.m05853 protein aldose 1-epimerase, putative, expressed
TAIR PP10 AT5G57330.1 +3 4e-166 477 230/304 (76%) Galactose mutarotase-like superfamily protein | chr5:23218392-23220664 FORWARD LENGTH=312