MLOC_61131 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains15.0069.230296.5655711.576
LEAShoots from the seedlings (10 cm shoot stage)4.8073813.711925.428815.038
INF1Young developing inflorescences (5mm)13.596416.368516.207915.7065
INF2Developing inflorescences (1-1.5 cm)14.870519.05521.562324.0773
ROORoots from the seedlings (10 cm shoot stage)12.890614.22938.7793519.5485
NODDeveloping tillers at six leaf stage, 3rd internode0.8418782.030533.368867.94473
CAR5Developing grain, bracts removed (5 DPA)10.045811.46639.7989412.6119
CAR15Developing grain, bracts removed (15 DPA)2.876133.194692.184788.01992



CDS Structure of MLOC_61131






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61131.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_61131.1CUST_14236_PI427708080AvailableAvailablecontig_45137 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g27930.1 -2 4e-70 216 106/134 (79%) 13109.m02743 protein ubiquitin fusion protein, putative, expressed
TAIR PP10 AT3G52590.1 -2 3e-61 192 96/136 (71%) | Symbols: UBQ1, EMB2167, ERD16, HAP4 | ubiquitin extension protein 1 | chr3:19505668-19506681 FORWARD LENGTH=128