MLOC_61129 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.162632.346231.834182.41856
LEAShoots from the seedlings (10 cm shoot stage)1.216471.768191.157661.10397
INF1Young developing inflorescences (5mm)0.01916910.02289080.0240760.0201012
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)3.025053.05791.947233.16258
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)00.04849370.02396670.0416256
CAR15Developing grain, bracts removed (15 DPA)000.0477050.16006



CDS Structure of MLOC_61129






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61129.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK361881NoneNoneNoneNone
MLOC_61129.2CUST_352_PI427708083AvailableAvailablecontig_45136 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g69200.1 -3 5e-133 268 141/168 (84%) 13101.m07557 protein regulatory protein, putative, expressed
TAIR PP10 AT4G19970.1 -3 2e-58 129 61/144 (42%) CONTAINS InterPro DOMAIN/s: Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferase family protein (TAIR:AT5G44820.1); Has 801 Blast hits to 466 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 750; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). | chr4:10818242-10825343 FORWARD LENGTH=715