- Predicted Gene MLOC_61129
MLOC_61129 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.16263 | 2.34623 | 1.83418 | 2.41856 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1.21647 | 1.76819 | 1.15766 | 1.10397 |
| INF1 | Young developing inflorescences (5mm) | 0.0191691 | 0.0228908 | 0.024076 | 0.0201012 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0 | 0 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 3.02505 | 3.0579 | 1.94723 | 3.16258 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0 | 0 | 0 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0 | 0.0484937 | 0.0239667 | 0.0416256 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0 | 0.047705 | 0.16006 |
CDS Structure of MLOC_61129
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_61129.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g69200.1 |
-3 |
5e-133 |
268 |
141/168 (84%) |
13101.m07557 protein regulatory protein, putative, expressed |
| TAIR PP10 |
AT4G19970.1 |
-3 |
2e-58 |
129 |
61/144 (42%) |
CONTAINS InterPro DOMAIN/s: Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferase family protein (TAIR:AT5G44820.1); Has 801 Blast hits to 466 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 750; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). | chr4:10818242-10825343 FORWARD LENGTH=715 |