MLOC_61081 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.260843.324683.954583.13395
LEAShoots from the seedlings (10 cm shoot stage)3.787110.49473.5734.19115
INF1Young developing inflorescences (5mm)0.661110.7777070.6353690.583167
INF2Developing inflorescences (1-1.5 cm)0.03101170.05986860.07273590.0556253
ROORoots from the seedlings (10 cm shoot stage)0.08618730.8771120.5207090.698194
NODDeveloping tillers at six leaf stage, 3rd internode9.301119.532917.6545322.4985
CAR5Developing grain, bracts removed (5 DPA)6.691837.013125.392195.93389
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_61081






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61081.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK361542NoneNoneNoneNone
MLOC_61081.1CUST_4402_PI427708080AvailableAvailablecontig_45084 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g26660.1 +2 1e-130 385 191/262 (73%) 13107.m02644 protein aquaporin protein, putative, expressed
TAIR PP10 AT3G54820.1 +2 4e-127 375 183/260 (70%) | Symbols: PIP2D, PIP2;5 | plasma membrane intrinsic protein 2;5 | chr3:20302117-20303738 FORWARD LENGTH=286