MLOC_61073 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.4950914.165113.558212.5739
LEAShoots from the seedlings (10 cm shoot stage)10.584410.74737.987768.30536
INF1Young developing inflorescences (5mm)15.105417.869117.531113.8254
INF2Developing inflorescences (1-1.5 cm)15.980719.023717.960118.8457
ROORoots from the seedlings (10 cm shoot stage)11.657414.099312.482616.4972
NODDeveloping tillers at six leaf stage, 3rd internode6.494228.736268.0484628.1615
CAR5Developing grain, bracts removed (5 DPA)19.797719.771319.972518.7741
CAR15Developing grain, bracts removed (15 DPA)5.856955.320685.9779612.7345



CDS Structure of MLOC_61073






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61073.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369587NoneNoneNoneNone
MLOC_61073.1CUST_4399_PI427708080AvailableAvailablecontig_45072 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g69210.1 -3 0.0 1466 709/824 (86%) 13101.m07558 protein mannosyl-oligosaccharide glucosidase, putative, expressed
TAIR PP10 AT1G67490.1 -3 0.0 985 463/769 (60%) | Symbols: GCS1, KNF | glucosidase 1 | chr1:25280633-25286581 REVERSE LENGTH=852