- Predicted Gene MLOC_61063
MLOC_61063 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 48.5837 | 49.024 | 49.8065 | 49.7872 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 50.4264 | 10.0143 | 16.2673 | 21.8412 |
INF1 | Young developing inflorescences (5mm) | 30.7267 | 31.9149 | 39.1949 | 29.8354 |
INF2 | Developing inflorescences (1-1.5 cm) | 31.7729 | 46.8759 | 47.3 | 46.5148 |
ROO | Roots from the seedlings (10 cm shoot stage) | 60.1558 | 43.6501 | 43.7244 | 54.4972 |
NOD | Developing tillers at six leaf stage, 3rd internode | 31.7975 | 29.0864 | 6.46839 | 78.1983 |
CAR5 | Developing grain, bracts removed (5 DPA) | 62.9846 | 65.9323 | 52.9058 | 60.4972 |
CAR15 | Developing grain, bracts removed (15 DPA) | 4.4449 | 3.78022 | 4.8008 | 10.3861 |
CDS Structure of MLOC_61063
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_61063.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g39750.3 |
+2 |
0.0 |
894 |
432/516 (84%) |
13106.m04124 protein 3-ketoacyl-CoA synthase, putative, expressed |
TAIR PP10 |
AT2G26640.1 |
+2 |
0.0 |
804 |
387/494 (78%) |
| Symbols: KCS11 | 3-ketoacyl-CoA synthase 11 | chr2:11330094-11331623 FORWARD LENGTH=509 |