MLOC_61063 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains48.583749.02449.806549.7872
LEAShoots from the seedlings (10 cm shoot stage)50.426410.014316.267321.8412
INF1Young developing inflorescences (5mm)30.726731.914939.194929.8354
INF2Developing inflorescences (1-1.5 cm)31.772946.875947.346.5148
ROORoots from the seedlings (10 cm shoot stage)60.155843.650143.724454.4972
NODDeveloping tillers at six leaf stage, 3rd internode31.797529.08646.4683978.1983
CAR5Developing grain, bracts removed (5 DPA)62.984665.932352.905860.4972
CAR15Developing grain, bracts removed (15 DPA)4.44493.780224.800810.3861



CDS Structure of MLOC_61063






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61063.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362351NoneNoneNoneNone
MLOC_61063.2CUST_4395_PI427708080AvailableAvailablecontig_45052 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g39750.3 +2 0.0 894 432/516 (84%) 13106.m04124 protein 3-ketoacyl-CoA synthase, putative, expressed
TAIR PP10 AT2G26640.1 +2 0.0 804 387/494 (78%) | Symbols: KCS11 | 3-ketoacyl-CoA synthase 11 | chr2:11330094-11331623 FORWARD LENGTH=509