- Predicted Gene MLOC_61052
MLOC_61052 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_61052_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_61052_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 3.90218 | 12.7401 | 10.1655 | 9.11006 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 8.77287 | 7.47962 | 4.21187 | 5.68087 |
INF1 | Young developing inflorescences (5mm) | 44.8653 | 42.8386 | 36.1159 | 32.7182 |
INF2 | Developing inflorescences (1-1.5 cm) | 32.7021 | 33.4626 | 29.7898 | 32.5348 |
ROO | Roots from the seedlings (10 cm shoot stage) | 4.13967 | 9.89808 | 7.2372 | 9.96678 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.318198 | 0.337847 | 0.651941 | 1.20151 |
CAR5 | Developing grain, bracts removed (5 DPA) | 14.1647 | 14.5177 | 15.878 | 13.1133 |
CAR15 | Developing grain, bracts removed (15 DPA) | 4.95732 | 4.93082 | 5.17943 | 10.348 |
CDS Structure of MLOC_61052
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_61052.6
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g28960.2 |
+2 |
0.0 |
1418 |
705/818 (86%) |
13103.m03324 protein DNA-directed RNA polymerase subunit, putative, expressed |
TAIR PP10 |
AT5G45140.1 |
+2 |
0.0 |
1077 |
540/796 (68%) |
| Symbols: NRPC2 | nuclear RNA polymerase C2 | chr5:18247416-18257713 REVERSE LENGTH=1161 |