MLOC_61038 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.09860720.1040420.0570960.103066
LEAShoots from the seedlings (10 cm shoot stage)0.067299100.06515370.0653815
INF1Young developing inflorescences (5mm)0.2360670.2903370.1339940.210234
INF2Developing inflorescences (1-1.5 cm)0.1815860.3790610.2833130.346527
ROORoots from the seedlings (10 cm shoot stage)0.02666170.04432620.04110670.0614649
NODDeveloping tillers at six leaf stage, 3rd internode0.05258090.08975640.0715360.300834
CAR5Developing grain, bracts removed (5 DPA)0.1755660.1135590.1417930.146474
CAR15Developing grain, bracts removed (15 DPA)0.08644870.05337320.01823840.152365



CDS Structure of MLOC_61038






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61038.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_61038.2NoneAvailableAvailablecontig_45027 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g02240.1 +3 1e-17 71 53/190 (28%) 13108.m00161 protein retrotransposon protein, putative, unclassified
TAIR PP10None-----