MLOC_61037 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains45.563531.638533.296236.7693
LEAShoots from the seedlings (10 cm shoot stage)5.072488.421949.565846.14959
INF1Young developing inflorescences (5mm)6.210146.060646.066155.61628
INF2Developing inflorescences (1-1.5 cm)5.709634.028714.253335.42406
ROORoots from the seedlings (10 cm shoot stage)14.356311.906315.956214.753
NODDeveloping tillers at six leaf stage, 3rd internode4.214096.320313.799823.3164
CAR5Developing grain, bracts removed (5 DPA)6.968967.281898.21377.9131
CAR15Developing grain, bracts removed (15 DPA)9.123687.975958.1701421.3001



CDS Structure of MLOC_61037






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61037.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364894NoneNoneNoneNone
MLOC_61037.1CUST_4392_PI427708080AvailableAvailablecontig_45027 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g06080.1 +3 0.0 531 300/370 (81%) 13107.m00572 protein FAD dependent oxidoreductase domain containing protein, expressed
TAIR PP10 AT5G67290.1 +3 2e-100 318 194/358 (54%) FAD-dependent oxidoreductase family protein | chr5:26848419-26849755 REVERSE LENGTH=406