MLOC_61035 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.951971.907012.42931.95257
LEAShoots from the seedlings (10 cm shoot stage)3.226060.7162031.84061.46305
INF1Young developing inflorescences (5mm)0.8971871.317381.589761.14
INF2Developing inflorescences (1-1.5 cm)1.778061.542591.709971.88914
ROORoots from the seedlings (10 cm shoot stage)4.256032.735592.841312.93152
NODDeveloping tillers at six leaf stage, 3rd internode5.262164.690393.8554210.2313
CAR5Developing grain, bracts removed (5 DPA)0.1570120.3911390.289660.293506
CAR15Developing grain, bracts removed (15 DPA)0.09911540.07281240.1141930.243914



CDS Structure of MLOC_61035






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61035.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK358762NoneNoneNoneNone
MLOC_61035.2CUST_4390_PI427708080AvailableAvailablecontig_45026 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g43290.1 +2 4e-162 470 266/367 (72%) 13102.m04806 protein protein kinase domain containing protein, expressed
TAIR PP10 AT1G33260.2 +2 2e-75 245 137/341 (40%) Protein kinase superfamily protein | chr1:12064796-12066114 FORWARD LENGTH=348