MLOC_61024 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.20040.8506391.142251.00277
LEAShoots from the seedlings (10 cm shoot stage)1.609410.7008051.147930.939164
INF1Young developing inflorescences (5mm)0.9523170.5153731.080490.763678
INF2Developing inflorescences (1-1.5 cm)0.1749420.4815080.4916570.448966
ROORoots from the seedlings (10 cm shoot stage)1.959791.711921.223871.85531
NODDeveloping tillers at six leaf stage, 3rd internode0.2609550.237750.263330.653805
CAR5Developing grain, bracts removed (5 DPA)2.952323.153072.37392.9238
CAR15Developing grain, bracts removed (15 DPA)0.01367380.01582360.03926690.0695928



CDS Structure of MLOC_61024






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61024.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_61024.1CUST_14228_PI427708080AvailableAvailablecontig_45013 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g32110.1 -2 0.0 569 302/493 (61%) 13110.m02806 protein exostosin family domain containing protein, expressed
TAIR PP10 AT2G20370.1 -2 5e-158 478 240/532 (45%) | Symbols: KAM1, MUR3 | Exostosin family protein | chr2:8792355-8794214 FORWARD LENGTH=619