MLOC_61023 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.858478.411457.819498.50496
LEAShoots from the seedlings (10 cm shoot stage)11.4856.144216.673087.27691
INF1Young developing inflorescences (5mm)11.153811.27499.754459.5915
INF2Developing inflorescences (1-1.5 cm)7.586858.938098.056069.47023
ROORoots from the seedlings (10 cm shoot stage)2.616143.165073.194944.03877
NODDeveloping tillers at six leaf stage, 3rd internode3.15093.580633.9941812.4754
CAR5Developing grain, bracts removed (5 DPA)6.53236.874576.613316.76433
CAR15Developing grain, bracts removed (15 DPA)2.704193.019022.277856.62021



CDS Structure of MLOC_61023






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_61023.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356524NoneNoneNoneNone
MLOC_61023.1CUST_4387_PI427708080AvailableAvailablecontig_45012 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g44160.2 +3 0.0 551 286/385 (74%) 13112.m04666 protein oxidoreductase, putative, expressed
TAIR PP10 AT5G39940.1 +3 0.0 548 280/434 (65%) FAD/NAD(P)-binding oxidoreductase family protein | chr5:15987649-15990561 FORWARD LENGTH=480