- Predicted Gene MLOC_61021
MLOC_61021 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 6.38797 | 8.20759 | 6.90079 | 7.86654 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 11.0509 | 10.9347 | 14.4343 | 10.6295 |
| INF1 | Young developing inflorescences (5mm) | 18.3444 | 18.2318 | 17.4481 | 16.4084 |
| INF2 | Developing inflorescences (1-1.5 cm) | 18.987 | 22.7043 | 21.6355 | 23.9179 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 11.444 | 11.2168 | 9.75864 | 13.5486 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 7.95916 | 10.0694 | 8.28517 | 28.9193 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 15.3772 | 13.9311 | 13.3449 | 14.2767 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 6.78437 | 7.34327 | 6.70036 | 17.0745 |
CDS Structure of MLOC_61021
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_61021.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g44170.1 |
+3 |
0.0 |
1379 |
694/865 (80%) |
13112.m04667 protein pentatricopeptide, putative, expressed |
| TAIR PP10 |
AT1G18900.2 |
+3 |
0.0 |
885 |
482/876 (55%) |
Pentatricopeptide repeat (PPR) superfamily protein | chr1:6529778-6532360 FORWARD LENGTH=860 |
