- Predicted Gene MLOC_61000
MLOC_61000 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_61000_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 23.743 | 45.5949 | 34.8055 | 39.5418 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 12.7429 | 26.5911 | 5.53498 | 13.2086 |
INF1 | Young developing inflorescences (5mm) | 0.162705 | 0.245214 | 0.142214 | 0.170443 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.16217 | 0.208619 | 0.224478 | 0.228839 |
ROO | Roots from the seedlings (10 cm shoot stage) | 64.3377 | 53.0447 | 64.1815 | 71.5871 |
NOD | Developing tillers at six leaf stage, 3rd internode | 5.37785 | 7.23012 | 1.06701 | 22.4675 |
CAR5 | Developing grain, bracts removed (5 DPA) | 24.7486 | 23.6151 | 26.1521 | 25.2378 |
CAR15 | Developing grain, bracts removed (15 DPA) | 6.66748 | 5.17027 | 12.264 | 17.7004 |
CDS Structure of MLOC_61000
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_61000.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os11g40590.3 |
-2 |
0.0 |
927 |
457/658 (69%) |
13111.m04022 protein DUF1399 containing protein, putative, expressed |
TAIR PP10 |
AT4G37900.1 |
-2 |
8e-167 |
518 |
294/654 (45%) |
Protein of unknown function (duplicated DUF1399) | chr4:17821737-17824445 REVERSE LENGTH=787 |