MLOC_60992 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains560.485484.131486.226531.839
LEAShoots from the seedlings (10 cm shoot stage)448.176105.671147.222209.701
INF1Young developing inflorescences (5mm)608.034600.711699.077570.266
INF2Developing inflorescences (1-1.5 cm)778.111683.846798.085840.838
ROORoots from the seedlings (10 cm shoot stage)723.395450.889482.546625.521
NODDeveloping tillers at six leaf stage, 3rd internode1604.12012.92164.777035.1
CAR5Developing grain, bracts removed (5 DPA)405.435428.743439.521432.37
CAR15Developing grain, bracts removed (15 DPA)99.324793.8419105.158233.934



CDS Structure of MLOC_60992






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60992.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362241NoneNoneNoneNone
MLOC_60992.1CUST_4383_PI427708080AvailableAvailablecontig_44980 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g59150.2 +2 0.0 848 427/430 (99%) 13101.m06285 protein tubulin/FtsZ domain containing protein, putative, expressed
TAIR PP10 AT5G12250.1 +2 0.0 838 420/430 (98%) | Symbols: TUB6 | beta-6 tubulin | chr5:3961317-3962971 REVERSE LENGTH=449