MLOC_60990 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.2160870.3695610.4939030.355386
LEAShoots from the seedlings (10 cm shoot stage)0.7492311.095510.3410270.569649
INF1Young developing inflorescences (5mm)0.0584087000.0538237
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)31.417524.983413.849225.8664
NODDeveloping tillers at six leaf stage, 3rd internode0.05037930.019935400.0625062
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_60990






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60990.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_60990.1CUST_17775_PI427708080AvailableAvailablecontig_44979 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g44780.1 -2 2e-140 413 216/357 (61%) 13107.m04714 protein GDSL-like lipase/acylhydrolase, putative, expressed
TAIR PP10 AT1G28650.1 -2 6e-79 254 148/360 (41%) GDSL-like Lipase/Acylhydrolase superfamily protein | chr1:10069547-10071082 REVERSE LENGTH=385