MLOC_60984 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.353164.475934.749985.11971
LEAShoots from the seedlings (10 cm shoot stage)4.956280.6575772.232122.0911
INF1Young developing inflorescences (5mm)0.5658620.435710.6151840.510549
INF2Developing inflorescences (1-1.5 cm)0.3978820.5383670.4240750.584026
ROORoots from the seedlings (10 cm shoot stage)9.342927.221186.62198.68966
NODDeveloping tillers at six leaf stage, 3rd internode40.373857.12214.0809118.15
CAR5Developing grain, bracts removed (5 DPA)1.30731.36991.465771.55891
CAR15Developing grain, bracts removed (15 DPA)0.1164480.1401490.2141920.420398



CDS Structure of MLOC_60984






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60984.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK373054NoneNoneNoneNone
MLOC_60984.1CUST_18221_PI427708080AvailableAvailablecontig_44964 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g04300.1 -2 0.0 871 455/565 (81%) 13101.m00388 protein glycosyl hydrolase family 10 protein, putative, expressed
TAIR PP10 AT1G58370.1 -2 3e-145 456 263/560 (47%) | Symbols: RXF12, ATXYN1 | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein | chr1:21684751-21688209 FORWARD LENGTH=917