- Predicted Gene MLOC_60978
MLOC_60978 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_60978_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_60978_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.755128 | 3.48538 | 0.624446 | 2.07237 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 5.87372 | 8.92785 | 30.1875 | 10.8876 |
INF1 | Young developing inflorescences (5mm) | 8.68265 | 4.69406 | 2.8774 | 4.76071 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.37468 | 0.259681 | 0.133579 | 0.306667 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.13029 | 1.59251 | 3.48763 | 1.84734 |
NOD | Developing tillers at six leaf stage, 3rd internode | 2.26171 | 0.375603 | 0.283263 | 0.663207 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.717069 | 1.05265 | 0.317539 | 0.718328 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.067729 | 0.0400108 | 0.048345 | 0.13892 |
CDS Structure of MLOC_60978
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_60978.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g08160.1 |
+2 |
3e-55 |
183 |
89/113 (79%) |
13107.m00805 protein early light-induced protein, chloroplast precursor, putative, expressed |
TAIR PP10 |
AT3G22840.1 |
+2 |
4e-40 |
143 |
73/109 (67%) |
| Symbols: ELIP1, ELIP | Chlorophyll A-B binding family protein | chr3:8084628-8085445 REVERSE LENGTH=195 |