MLOC_60959 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains32.237635.779335.087931.4961
LEAShoots from the seedlings (10 cm shoot stage)41.537243.121629.286729.4077
INF1Young developing inflorescences (5mm)29.220641.278233.019726.9843
INF2Developing inflorescences (1-1.5 cm)26.921227.277323.712826.5305
ROORoots from the seedlings (10 cm shoot stage)15.712927.196722.596125.6683
NODDeveloping tillers at six leaf stage, 3rd internode14.777513.807313.827140.7825
CAR5Developing grain, bracts removed (5 DPA)29.16430.184331.27926.3738
CAR15Developing grain, bracts removed (15 DPA)16.544314.430114.728333.5521



CDS Structure of MLOC_60959






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60959.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370450NoneNoneNoneNone
MLOC_60959.2CUST_4376_PI427708080AvailableAvailablecontig_44943 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g17600.3 +3 0.0 664 393/443 (89%) 13109.m01690 protein membrane protein, putative, expressed
TAIR PP10 AT2G25737.1 +3 2e-165 488 313/445 (70%) Sulfite exporter TauE/SafE family protein | chr2:10977174-10979677 FORWARD LENGTH=476