- Predicted Gene MLOC_60953
MLOC_60953 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 24.5178 | 29.9155 | 29.3452 | 23.7341 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 29.5608 | 30.4016 | 26.4294 | 20.4227 |
| INF1 | Young developing inflorescences (5mm) | 46.7287 | 42.5427 | 48.6028 | 33.0583 |
| INF2 | Developing inflorescences (1-1.5 cm) | 45.7716 | 44.4609 | 51.066 | 42.0846 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 27.0713 | 37.3717 | 57.3893 | 35.3507 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 24.8076 | 6.51114 | 19.4849 | 21.3169 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 28.8207 | 34.011 | 34.3619 | 25.1547 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 9.77047 | 9.0887 | 10.8112 | 19.9879 |
CDS Structure of MLOC_60953
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_60953.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g57790.2 |
-1 |
3e-27 |
108 |
48/50 (96%) |
13103.m06340 protein ubiquitin-conjugating enzyme, putative, expressed |
| TAIR PP10 |
AT2G02760.1 |
-1 |
2e-26 |
105 |
47/50 (94%) |
| Symbols: ATUBC2, UBC2 | ubiquiting-conjugating enzyme 2 | chr2:774271-775149 FORWARD LENGTH=152 |