MLOC_60943 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.058651.442371.195681.31111
LEAShoots from the seedlings (10 cm shoot stage)5.24990.2595831.681271.94644
INF1Young developing inflorescences (5mm)0.3465020.1065240.04541860.152637
INF2Developing inflorescences (1-1.5 cm)0.037728400.1593950.10089
ROORoots from the seedlings (10 cm shoot stage)0.3546470.434940.250970.444644
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)1.346791.869152.279781.90746
CAR15Developing grain, bracts removed (15 DPA)0.2196810.01968450.169480.332956



CDS Structure of MLOC_60943






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60943.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_60943.2CUST_14210_PI427708080AvailableAvailablecontig_44922 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g23924.1 -3 0.0 938 461/560 (82%) 13105.m02440 protein glycosyl hydrolase family 10 protein, putative, expressed
TAIR PP10 AT4G38650.1 -3 0.0 598 301/563 (53%) Glycosyl hydrolase family 10 protein | chr4:18063377-18065769 FORWARD LENGTH=562