MLOC_60935 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.6967611.017611.108510.7304
LEAShoots from the seedlings (10 cm shoot stage)45.291784.199682.752661.5632
INF1Young developing inflorescences (5mm)7.50887.210526.145315.80842
INF2Developing inflorescences (1-1.5 cm)4.76936.081465.469066.02243
ROORoots from the seedlings (10 cm shoot stage)12.226615.580411.401817.775
NODDeveloping tillers at six leaf stage, 3rd internode18.069623.251422.026974.1607
CAR5Developing grain, bracts removed (5 DPA)12.839913.130311.749612.577
CAR15Developing grain, bracts removed (15 DPA)4.555154.696044.502911.5



CDS Structure of MLOC_60935






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60935.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357795NoneNoneNoneNone
MLOC_60935.1CUST_4372_PI427708080AvailableAvailablecontig_44918 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g33490.1 -3 0.0 890 462/536 (86%) 13104.m03238 protein neutral/alkaline invertase, putative, expressed
TAIR PP10 AT5G22510.1 -3 0.0 796 397/489 (81%) | Symbols: INV-E, At-A/N-InvE | alkaline/neutral invertase | chr5:7474974-7477479 REVERSE LENGTH=617