MLOC_6092 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 18.3035 | 12.0175 | 13.1257 | 14.809 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 10.9923 | 13.5519 | 16.5621 | 12.4134 |
| INF1 | Young developing inflorescences (5mm) | 24.3641 | 23.6119 | 19.3727 | 20.1321 |
| INF2 | Developing inflorescences (1-1.5 cm) | 17.6847 | 14.7936 | 15.8759 | 18.7685 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 11.7997 | 14.0109 | 14.8456 | 18.2004 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.84133 | 2.77357 | 7.65753 | 13.3785 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 15.5474 | 14.0909 | 14.4253 | 15.4542 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 8.27211 | 8.26568 | 6.76392 | 19.2109 |
CDS Structure of MLOC_6092
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_6092.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g37870.1 |
+2 |
0.0 |
540 |
287/333 (86%) |
13102.m04151 protein Brix domain containing protein, putative, expressed |
| TAIR PP10 |
AT1G52930.1 |
+2 |
2e-163 |
468 |
238/321 (74%) |
Ribosomal RNA processing Brix domain protein | chr1:19711261-19713103 FORWARD LENGTH=320 |
