- Predicted Gene MLOC_60915
MLOC_60915 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.426344 | 0.629853 | 0.125305 | 0.400307 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 5.54503 | 8.93347 | 7.15245 | 5.10874 |
| INF1 | Young developing inflorescences (5mm) | 0.0848539 | 0 | 0.522025 | 0.176002 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.0651335 | 0 | 0.0921724 | 0.110004 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.78019 | 2.48594 | 2.01419 | 2.33812 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.0087001 | 0 | 0.0720659 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.21501 | 2.6595 | 2.4286 | 1.56301 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 10.8542 | 9.49933 | 5.06533 | 16.1839 |
CDS Structure of MLOC_60915
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_60915.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os08g28240.1 |
-3 |
3e-38 |
144 |
72/112 (64%) |
13108.m02917 protein carotenoid cleavage dioxygenase, putative |
| TAIR PP10 |
AT3G63520.1 |
-3 |
1e-13 |
71 |
36/75 (48%) |
| Symbols: CCD1, ATCCD1, ATNCED1, NCED1 | carotenoid cleavage dioxygenase 1 | chr3:23452940-23455896 FORWARD LENGTH=538 |