MLOC_60900 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains82.217694.028692.044991.4972
LEAShoots from the seedlings (10 cm shoot stage)61.879750.20953.705549.115
INF1Young developing inflorescences (5mm)74.053268.717969.028160.2145
INF2Developing inflorescences (1-1.5 cm)56.504464.257263.01868.1525
ROORoots from the seedlings (10 cm shoot stage)56.418679.015576.279595.7405
NODDeveloping tillers at six leaf stage, 3rd internode60.380451.256651.4978189.204
CAR5Developing grain, bracts removed (5 DPA)80.138985.961884.861183.1346
CAR15Developing grain, bracts removed (15 DPA)24.519922.761220.588153.0999



CDS Structure of MLOC_60900






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60900.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_60900.1CUST_14205_PI427708080AvailableAvailablecontig_44885 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g39760.1 +1 0.0 622 293/333 (88%) 13106.m04126 protein WD domain, G-beta repeat domain containing protein, expressed
TAIR PP10 AT3G15610.1 +1 0.0 560 268/332 (81%) Transducin/WD40 repeat-like superfamily protein | chr3:5291076-5292796 REVERSE LENGTH=341