- Predicted Gene MLOC_60900
MLOC_60900 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 82.2176 | 94.0286 | 92.0449 | 91.4972 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 61.8797 | 50.209 | 53.7055 | 49.115 |
| INF1 | Young developing inflorescences (5mm) | 74.0532 | 68.7179 | 69.0281 | 60.2145 |
| INF2 | Developing inflorescences (1-1.5 cm) | 56.5044 | 64.2572 | 63.018 | 68.1525 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 56.4186 | 79.0155 | 76.2795 | 95.7405 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 60.3804 | 51.2566 | 51.4978 | 189.204 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 80.1389 | 85.9618 | 84.8611 | 83.1346 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 24.5199 | 22.7612 | 20.5881 | 53.0999 |
CDS Structure of MLOC_60900
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_60900.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g39760.1 |
+1 |
0.0 |
622 |
293/333 (88%) |
13106.m04126 protein WD domain, G-beta repeat domain containing protein, expressed |
| TAIR PP10 |
AT3G15610.1 |
+1 |
0.0 |
560 |
268/332 (81%) |
Transducin/WD40 repeat-like superfamily protein | chr3:5291076-5292796 REVERSE LENGTH=341 |