MLOC_60894 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.676463.794363.513314.72898
LEAShoots from the seedlings (10 cm shoot stage)6.408947.514076.06666.08551
INF1Young developing inflorescences (5mm)6.449457.749898.095417.2541
INF2Developing inflorescences (1-1.5 cm)7.9415310.41528.8443111.8298
ROORoots from the seedlings (10 cm shoot stage)8.172565.385645.144567.71183
NODDeveloping tillers at six leaf stage, 3rd internode9.4693512.205719.950547.5008
CAR5Developing grain, bracts removed (5 DPA)7.608886.740386.85958.12172
CAR15Developing grain, bracts removed (15 DPA)2.375842.478361.940076.24493



CDS Structure of MLOC_60894






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60894.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_60894.1CUST_14203_PI427708080AvailableAvailablecontig_44880 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g50310.1 -3 1e-97 298 203/275 (74%) 13106.m05405 protein E2F-related protein, putative, expressed
TAIR PP10 AT4G35040.1 -3 5e-40 146 116/245 (47%) | Symbols: bZIP19 | Basic-leucine zipper (bZIP) transcription factor family protein | chr4:16680821-16681805 FORWARD LENGTH=261