MLOC_60893 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.9766710.97788.910457.89238
LEAShoots from the seedlings (10 cm shoot stage)6.636263.399843.0323.52102
INF1Young developing inflorescences (5mm)25.60824.914925.98618.8979
INF2Developing inflorescences (1-1.5 cm)25.941727.162824.48825.3686
ROORoots from the seedlings (10 cm shoot stage)5.189337.079776.899886.86604
NODDeveloping tillers at six leaf stage, 3rd internode2.213862.459842.476667.25599
CAR5Developing grain, bracts removed (5 DPA)8.602628.865879.054357.43261
CAR15Developing grain, bracts removed (15 DPA)4.855432.808533.658497.85155



CDS Structure of MLOC_60893






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60893.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_60893.1CUST_14202_PI427708080AvailableAvailablecontig_44880 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g43120.1 +3 0.0 1368 761/892 (85%) 13112.m04547 protein expressed protein
TAIR PP10 AT1G06590.1 +3 0.0 752 474/917 (52%) unknown protein; Has 380 Blast hits to 268 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 245; Fungi - 73; Plants - 49; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). | chr1:2016504-2024505 REVERSE LENGTH=916