- Predicted Gene MLOC_60893
MLOC_60893 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 5.97667 | 10.9778 | 8.91045 | 7.89238 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 6.63626 | 3.39984 | 3.032 | 3.52102 |
| INF1 | Young developing inflorescences (5mm) | 25.608 | 24.9149 | 25.986 | 18.8979 |
| INF2 | Developing inflorescences (1-1.5 cm) | 25.9417 | 27.1628 | 24.488 | 25.3686 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 5.18933 | 7.07977 | 6.89988 | 6.86604 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 2.21386 | 2.45984 | 2.47666 | 7.25599 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 8.60262 | 8.86587 | 9.05435 | 7.43261 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 4.85543 | 2.80853 | 3.65849 | 7.85155 |
CDS Structure of MLOC_60893
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_60893.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g43120.1 |
+3 |
0.0 |
1368 |
761/892 (85%) |
13112.m04547 protein expressed protein |
| TAIR PP10 |
AT1G06590.1 |
+3 |
0.0 |
752 |
474/917 (52%) |
unknown protein; Has 380 Blast hits to 268 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 245; Fungi - 73; Plants - 49; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). | chr1:2016504-2024505 REVERSE LENGTH=916 |