MLOC_60891 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000.0357258
LEAShoots from the seedlings (10 cm shoot stage)00.028856700.0190256
INF1Young developing inflorescences (5mm)00.01469760.03234580.0248345
INF2Developing inflorescences (1-1.5 cm)0.013211300.01668070.0190667
ROORoots from the seedlings (10 cm shoot stage)0.0304752000.0142534
NODDeveloping tillers at six leaf stage, 3rd internode00.004810170.004083530.0423603
CAR5Developing grain, bracts removed (5 DPA)3.423064.091394.331653.35557
CAR15Developing grain, bracts removed (15 DPA)12.673712.204512.920127.8716



CDS Structure of MLOC_60891






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60891.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_60891.1NoneAvailableAvailablecontig_44878 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g17480.1 -2 1e-43 163 78/92 (85%) 13106.m01921 protein histone-like transcription factor and archaeal histone, putative, expressed
TAIR PP10 AT5G47670.2 -2 8e-41 152 69/91 (76%) | Symbols: NF-YB6, L1L | nuclear factor Y, subunit B6 | chr5:19315358-19315975 FORWARD LENGTH=205