MLOC_60846 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1597730.1969260.2094830.133326
LEAShoots from the seedlings (10 cm shoot stage)0.2542420.1276260.1048610.111754
INF1Young developing inflorescences (5mm)0.1439150.2135610.1758380.0944448
INF2Developing inflorescences (1-1.5 cm)1.394460.1448860.2123340.577839
ROORoots from the seedlings (10 cm shoot stage)00.1503540.2431420.140367
NODDeveloping tillers at six leaf stage, 3rd internode000.01964820.0228014
CAR5Developing grain, bracts removed (5 DPA)00.05862270.1503110.0834016
CAR15Developing grain, bracts removed (15 DPA)000.1175120.0733838



CDS Structure of MLOC_60846






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60846.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_60846.1NoneAvailableAvailablecontig_44849 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g12360.1 +2 2e-40 129 80/150 (53%) 13105.m01344 protein retrotransposon protein, putative, unclassified
TAIR PP10None-----