MLOC_60844 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.03323150.1903060.03934430.132474
LEAShoots from the seedlings (10 cm shoot stage)0.1387970.1015020.04793840.0849523
INF1Young developing inflorescences (5mm)0.07268090.08005860.03122790.0577584
INF2Developing inflorescences (1-1.5 cm)1.019870.2791250.2894370.607792
ROORoots from the seedlings (10 cm shoot stage)00.03154300.152541
NODDeveloping tillers at six leaf stage, 3rd internode00.004362610.05372650.0637593
CAR5Developing grain, bracts removed (5 DPA)0.07992450.07504880.1683960.118912
CAR15Developing grain, bracts removed (15 DPA)0.07240530.05343310.1793060.233848



CDS Structure of MLOC_60844






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60844.6
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_60844.6NoneAvailableAvailablecontig_44849 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g24780.1 +3 5e-13 62 34/81 (42%) 13110.m02082 protein retrotransposon protein, putative, Ty3-gypsy subclass
TAIR PP10None-----