MLOC_60821 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.32717.27714.875115.0244
LEAShoots from the seedlings (10 cm shoot stage)9.3412910.68359.725478.33884
INF1Young developing inflorescences (5mm)16.540219.094317.75114.856
INF2Developing inflorescences (1-1.5 cm)29.653830.021127.788830.7733
ROORoots from the seedlings (10 cm shoot stage)8.285712.352810.476113.5053
NODDeveloping tillers at six leaf stage, 3rd internode7.5231610.820413.074335.0394
CAR5Developing grain, bracts removed (5 DPA)15.959716.974716.409115.2045
CAR15Developing grain, bracts removed (15 DPA)7.437547.129677.3849516.2876



CDS Structure of MLOC_60821






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60821.6
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK373871NoneNoneNoneNone
MLOC_60821.6CUST_4357_PI427708080AvailableAvailablecontig_44816 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g39300.2 -1 0.0 1191 576/655 (88%) 13107.m04070 protein expressed protein
TAIR PP10 AT1G45150.1 -1 0.0 865 411/644 (64%) unknown protein; Has 219 Blast hits to 202 proteins in 78 species: Archae - 0; Bacteria - 166; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). | chr1:17077615-17082330 REVERSE LENGTH=643