- Predicted Gene MLOC_60821
MLOC_60821 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 11.327 | 17.277 | 14.8751 | 15.0244 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 9.34129 | 10.6835 | 9.72547 | 8.33884 |
| INF1 | Young developing inflorescences (5mm) | 16.5402 | 19.0943 | 17.751 | 14.856 |
| INF2 | Developing inflorescences (1-1.5 cm) | 29.6538 | 30.0211 | 27.7888 | 30.7733 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 8.2857 | 12.3528 | 10.4761 | 13.5053 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 7.52316 | 10.8204 | 13.0743 | 35.0394 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 15.9597 | 16.9747 | 16.4091 | 15.2045 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 7.43754 | 7.12967 | 7.38495 | 16.2876 |
CDS Structure of MLOC_60821
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_60821.6
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g39300.2 |
-1 |
0.0 |
1191 |
576/655 (88%) |
13107.m04070 protein expressed protein |
| TAIR PP10 |
AT1G45150.1 |
-1 |
0.0 |
865 |
411/644 (64%) |
unknown protein; Has 219 Blast hits to 202 proteins in 78 species: Archae - 0; Bacteria - 166; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). | chr1:17077615-17082330 REVERSE LENGTH=643 |