MLOC_60802 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains21.361719.506420.933520.0912
LEAShoots from the seedlings (10 cm shoot stage)15.846622.622120.065416.1162
INF1Young developing inflorescences (5mm)0.0625381000.0601012
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)10.040610.684310.333112.599
NODDeveloping tillers at six leaf stage, 3rd internode7.280726.613624.404130.6651
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0.126140.2353860.1388150.396821



CDS Structure of MLOC_60802






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60802.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363980NoneNoneNoneNone
MLOC_60802.1CUST_4353_PI427708080AvailableAvailablecontig_44798 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g66850.1 +3 2e-167 485 239/380 (63%) 13101.m42769 protein pectinacetylesterase domain containing protein, expressed
TAIR PP10 AT3G09410.1 +3 8e-127 381 189/371 (51%) Pectinacetylesterase family protein | chr3:2898243-2900984 REVERSE LENGTH=427