- Predicted Gene MLOC_60802
MLOC_60802 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_60802_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_60802_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 21.3617 | 19.5064 | 20.9335 | 20.0912 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 15.8466 | 22.6221 | 20.0654 | 16.1162 |
INF1 | Young developing inflorescences (5mm) | 0.0625381 | 0 | 0 | 0.0601012 |
INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0 | 0 |
ROO | Roots from the seedlings (10 cm shoot stage) | 10.0406 | 10.6843 | 10.3331 | 12.599 |
NOD | Developing tillers at six leaf stage, 3rd internode | 7.28072 | 6.6136 | 24.4041 | 30.6651 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0 | 0 | 0 | 0 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.12614 | 0.235386 | 0.138815 | 0.396821 |
CDS Structure of MLOC_60802
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_60802.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g66850.1 |
+3 |
2e-167 |
485 |
239/380 (63%) |
13101.m42769 protein pectinacetylesterase domain containing protein, expressed |
TAIR PP10 |
AT3G09410.1 |
+3 |
8e-127 |
381 |
189/371 (51%) |
Pectinacetylesterase family protein | chr3:2898243-2900984 REVERSE LENGTH=427 |