- Predicted Gene MLOC_60786
MLOC_60786 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_60786_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_60786_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 3.49055 | 7.4439 | 4.80329 | 5.2057 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 4.22874 | 1.74878 | 4.21237 | 2.88128 |
INF1 | Young developing inflorescences (5mm) | 10.8186 | 8.50406 | 10.4354 | 7.42736 |
INF2 | Developing inflorescences (1-1.5 cm) | 10.7958 | 12.4888 | 9.53767 | 11.2243 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.499776 | 4.7302 | 4.62311 | 4.46635 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.33911 | 2.66279 | 3.31671 | 8.72449 |
CAR5 | Developing grain, bracts removed (5 DPA) | 6.34202 | 5.15881 | 6.629 | 5.04132 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.83729 | 2.03668 | 2.75542 | 5.3741 |
CDS Structure of MLOC_60786
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_60786.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g05810.2 |
+3 |
6e-63 |
210 |
106/131 (81%) |
13105.m00616 protein DEAD-box ATP-dependent RNA helicase, putative, expressed |
TAIR PP10 |
AT5G27680.1 |
+3 |
1e-46 |
164 |
82/128 (64%) |
| Symbols: RECQSIM | RECQ helicase SIM | chr5:9794244-9798637 REVERSE LENGTH=858 |