MLOC_60783 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.3175650.05616680.1582720.154884
LEAShoots from the seedlings (10 cm shoot stage)0.094415800.3798780.1446
INF1Young developing inflorescences (5mm)0.1014020.3813670.06279030.168698
INF2Developing inflorescences (1-1.5 cm)0.196480.512620.1893750.35377
ROORoots from the seedlings (10 cm shoot stage)0.6748860.7860310.3434850.842682
NODDeveloping tillers at six leaf stage, 3rd internode0.08663550.1452930.1005680.419167
CAR5Developing grain, bracts removed (5 DPA)0.3065860.2824930.2523870.266214
CAR15Developing grain, bracts removed (15 DPA)0.05471420.17764200.205594



CDS Structure of MLOC_60783






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60783.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_60783.1CUST_8325_PI427708083AvailableAvailablecontig_44773 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g41560.1 -3 3e-108 338 172/310 (55%) 13106.m04338 protein receptor-like protein kinase, putative, expressed
TAIR PP10 AT5G60900.1 -3 1e-34 134 94/305 (31%) | Symbols: RLK1 | receptor-like protein kinase 1 | chr5:24498467-24501494 REVERSE LENGTH=748