MLOC_60782 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.21688400.0929462
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)00.6548120.2608620.231553
INF2Developing inflorescences (1-1.5 cm)00.6692190.239950.337898
ROORoots from the seedlings (10 cm shoot stage)00.47661200.371365
NODDeveloping tillers at six leaf stage, 3rd internode0.3763530.2649260.1243840.724362
CAR5Developing grain, bracts removed (5 DPA)00.20456700.0697084
CAR15Developing grain, bracts removed (15 DPA)00.22796800.172106



CDS Structure of MLOC_60782






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60782.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_60782.1CUST_8324_PI427708083AvailableAvailablecontig_44773 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g41510.1 -3 2e-52 178 84/112 (75%) 13106.m04333 protein D-mannose binding lectin family protein
TAIR PP10 AT2G37050.2 -3 1e-20 88 44/92 (48%) Leucine-rich repeat protein kinase family protein | chr2:15569290-15572545 FORWARD LENGTH=714