- Predicted Gene MLOC_60780
MLOC_60780 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 6.07818 | 4.90161 | 5.835 | 4.48827 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 4.52198 | 1.0642 | 1.95193 | 2.01409 |
| INF1 | Young developing inflorescences (5mm) | 5.60771 | 7.09491 | 7.88103 | 4.3906 |
| INF2 | Developing inflorescences (1-1.5 cm) | 6.09463 | 7.08049 | 6.64314 | 5.84766 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 3.36513 | 3.468 | 3.73017 | 3.28365 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 3.11247 | 2.75477 | 2.23581 | 7.39508 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 5.89217 | 6.22255 | 5.23127 | 4.40629 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.17348 | 0.96373 | 1.51255 | 2.07739 |
CDS Structure of MLOC_60780
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_60780.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g41590.3 |
+1 |
1e-171 |
503 |
239/267 (90%) |
13106.m04343 protein YIF1B, putative, expressed |
| TAIR PP10 |
AT3G59500.1 |
+1 |
3e-120 |
369 |
174/256 (68%) |
Integral membrane HRF1 family protein | chr3:21987110-21988169 FORWARD LENGTH=269 |