- Predicted Gene MLOC_60773
MLOC_60773 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_60773_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 41.5966 | 33.1652 | 34.7589 | 32.3211 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 38.4308 | 59.377 | 44.6587 | 34.3931 |
INF1 | Young developing inflorescences (5mm) | 21.7703 | 27.831 | 40.4072 | 23.4141 |
INF2 | Developing inflorescences (1-1.5 cm) | 29.1123 | 29.2082 | 28.485 | 29.6111 |
ROO | Roots from the seedlings (10 cm shoot stage) | 196.463 | 84.5266 | 89.1182 | 100.921 |
NOD | Developing tillers at six leaf stage, 3rd internode | 95.0262 | 106.986 | 146.481 | 277.5 |
CAR5 | Developing grain, bracts removed (5 DPA) | 27.8262 | 34.3994 | 32.5111 | 27.9748 |
CAR15 | Developing grain, bracts removed (15 DPA) | 43.2408 | 42.5072 | 39.4984 | 95.4856 |
CDS Structure of MLOC_60773
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_60773.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g50970.1 |
-1 |
1e-30 |
120 |
70/88 (80%) |
13104.m05182 protein seed specific protein Bn15D1B, putative, expressed |
TAIR PP10 |
AT5G17165.1 |
-1 |
1e-13 |
71 |
42/92 (46%) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03150.1); Has 39 Blast hits to 39 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:5643143-5647702 REVERSE LENGTH=116 |